Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946678.1_cds_XP_016488717.1_79319
CDS Infomation

[gene=LOC107808694] [db_xref=GeneID:107808694] [protein=probable methyltransferase PMT11] [protein_id=XP_016488717.1] [location=join(38057..38722,39345..39494,39599..39869,40645..40755,41517..41676,44625..44882,44996..45118,45507..45584,45736..45943)] [gbkey=CDS]
Sequence

ATGAAGGGGTTGAGTGGAGATTTACTCAGGTCCACTACTGTTATCAAAGTGTTGGCTTTC
GTGTTCTTAGCCGTCGCTTTCTTCTACTTCGGCAAACATTGGTCTGATGGATCGTCTCAA
CAGCTCCTTTTCTTCAATTCGCGCCAAAACCCATCTGGGCTCATCTCTCCTTCAGCTGTT
TCTCTTTCCTCCAATTTCAATAAAACTTATGATTTATCCACTGTTATTAACGATACCAAC
AGACAGCAAGCGGGTGAAGTTTCAATTCCGCCACCGCCGGCGGTTACTTTGTCTCCTTCC
CCACCGCCACCGTCGGCGGTGCAGCATATGGGTTTATTGGACGAGAATGGAGTAATGAAG
GAAGATTTCGCGGTGGGGGATTATGATCCGGATGTTGTGGAGAATTGGCCGGGTGTTGGA
AACGAGACAGATTTGTCGGAAAACAATAAGGTTGTTAAGGTTAAGAAATTCGGGCTCTGT
CCTGAGAGTATGAGGGAGTACATTCCGTGCCTTGACAATGTGGAGGCTATCCAAAAGCTG
AATTCAACGGAGAAAGGTGATAAATTCGAACGGCATTGTCCTGAAAAAGATAAGGGGTTG
AATTGCTTGGTTCCTGCACCTAGAGGTTACCAAGCTCCAATTCCATGGCCCAGGAGCCGT
GATGAGGTTTGGTTCAGCAATGTTCCCCATGCACGTCTAGTTGAAGATAAAGGGGGTCAA
AATTGGATCACCATAGACAAGGACAAGTTCAAATTTCCTGGTGGCGGCACCCAGTTCATA
CATGGAGCTGATCAGTATTTGGATCAGATTGAGAAGATGGTCCCTGAAATTGCATTTGGT
CGTCATACCCGAGTTGCTTTGGATATTGGTTGCGGCGTAGCAAGCTTTGGTGCTTATTTA
CTATCACGGAATGTGCTCGCTCTGTCAATTGCTCCAAAAGATGTTCATGAAAACCAGATT
CAATTTGCTCTTGAGCGCGGGGTGCCTGCAATGGTGGCTGCATTTGCAACACATCGGTTA
ATGTATCCCAGCCAGGCATTTGAATTAATCCATTGTTCAAGGTGTAGGATCAATTGGACT
CGTGATGATGGTATTTTACTATTGGAGGTGAACAGGATGCTCCGTGCCGGAGGATATTTT
GTTTGGGCTGCACAACCCGTTTATAAGCATGAAGCTGCCCTAGAAGAACAATGGGAAGAG
ATGGTTAATCTAACAACCCGTCTTTGCTGGAAGCTTGTGAAGAAGGAAGGTTATATTGCA
ATATGGCAGAAGCCTTTAAACAACAGTTGCTATTTAAGCCGCGAAGAAGGATCCCAACCG
CCGCTTTGTGATCCACAGGATGATCCAGACAATGTTTGGTATGTTGATCTGAAAGCTTGT
ATTACGAGACTACCAGAAGAAGGATATGGTGCAAATATTACCACATGGCCTTCACGCCTT
CACGATCCACCAGAGAGGCTCCAGAGCATACAACTTGATGCATATATATCTAGAAAAGAG
CTTTTCAGGGCAGAGTCAAGATTCTGGAAAGAAATAATTGAAAGTTATGTCCGTGCCTTG
CACTGGAAGAACTTCAAACTTAGAAATGTGTTGGATATGCGAGCTGGTTTTGGAGGATTT
GCTGCAGCATTGGTTGAAAATCAACTGGATTGCTGGGTTCTAAATGTTGTCCCTGTTAGT
GGCCGAAATACCTTACCCATCATATATGACCGTGGACTACTTGGAGTCATGCATGACTGG
TGTGAACCATTTGATACTTACCCAAGAACATATGACTTGTTGCATGCGCATGGTCTCTTC
TCCATTGAAAGGAAAAGATGCAACATATCCACAATCATGCTTGAAATGGATCGGTTATTA
AGACCTGGTGGACGGATATACATCCGTGATTCTCTTGCTGTTATGGATGAACTTCAGGAA
GTTGGAAAAGCCATGGGTTGGCACGTATCTCTGAGGGACACATCTGAGGGTCCTCATGCA
AGTTACAGGATTTTGACATGTGACAAACGTCTTTTACGAGCCTGA

Peptide Sequence

PEP ID

XP_016488717.1
PEP Infomation

PREDICTED: probable methyltransferase PMT11 [Nicotiana tabacum]
Sequence

MKGLSGDLLRSTTVIKVLAFVFLAVAFFYFGKHWSDGSSQQLLFFNSRQNPSGLISPSAV
SLSSNFNKTYDLSTVINDTNRQQAGEVSIPPPPAVTLSPSPPPPSAVQHMGLLDENGVMK
EDFAVGDYDPDVVENWPGVGNETDLSENNKVVKVKKFGLCPESMREYIPCLDNVEAIQKL
NSTEKGDKFERHCPEKDKGLNCLVPAPRGYQAPIPWPRSRDEVWFSNVPHARLVEDKGGQ
NWITIDKDKFKFPGGGTQFIHGADQYLDQIEKMVPEIAFGRHTRVALDIGCGVASFGAYL
LSRNVLALSIAPKDVHENQIQFALERGVPAMVAAFATHRLMYPSQAFELIHCSRCRINWT
RDDGILLLEVNRMLRAGGYFVWAAQPVYKHEAALEEQWEEMVNLTTRLCWKLVKKEGYIA
IWQKPLNNSCYLSREEGSQPPLCDPQDDPDNVWYVDLKACITRLPEEGYGANITTWPSRL
HDPPERLQSIQLDAYISRKELFRAESRFWKEIIESYVRALHWKNFKLRNVLDMRAGFGGF
AAALVENQLDCWVLNVVPVSGRNTLPIIYDRGLLGVMHDWCEPFDTYPRTYDLLHAHGLF
SIERKRCNISTIMLEMDRLLRPGGRIYIRDSLAVMDELQEVGKAMGWHVSLRDTSEGPHA
SYRILTCDKRLLRA

Transcript Sequence

Gene sequence data has not been registered.